PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008242571.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 382aa    MW: 41302 Da    PI: 6.8426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008242571.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000512452831255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_008242571.1 245 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 283
                     6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.553233282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.77E-6243287No hitNo description
SuperFamilySSF474595.89E-10243293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-7247289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MNRGVNLQSS PVQQMMAGNP NWWNINSMRP PTQPSVTSPF LPPSPPPPSF FIPQFVPNTS  60
SSPSTTSSGL PFPSWHIDDN IQELPESWSQ LLLGGLVGED EKGALMRQFH QAKNKLENWG  120
EQILSSTQAP NAPAADVKQE SSGCGSFVYG HQQGVNDHQH HQDFQSAALS SLSQIMQSTA  180
SASSSPKSSC VTSFNTSMLD FSSKSDVRHP PPHRSSDQCN STANGGGALK RARVQPSSSP  240
TFKVRKEKLG DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQSQIEALS LPYLGNGSGN  300
MRQQPQSAVH GERNCMFPED PGQLLNDNCM KRKGAPEQDA DEEAKKDLRS RGLCLVPVSC  360
TLQVGSDNGA DYWAPALGGG FQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008242571.10.0PREDICTED: transcription factor bHLH68
SwissprotQ8S3D19e-97BH068_ARATH; Transcription factor bHLH68
TrEMBLM5VWU80.0M5VWU8_PRUPE; Uncharacterized protein
STRINGVIT_11s0016g03560.t011e-155(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-85bHLH family protein